PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr10P02340_001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family HB-other
Protein Properties Length: 102aa    MW: 11506 Da    PI: 9.2891
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr10P02340_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.74.1e-083273054
                            HHHHHHHCTS-HHHHHHHHHHHHHH CS
                Homeobox 30 reeLAkklgLterqVkvWFqNrRak 54
                            ++ LAk++g+t +qV++WF N R +
  GSMUA_Achr10P02340_001  3 KQNLAKQTGITRNQVSNWFINARVR 27
                            799********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5007110.349131IPR001356Homeobox domain
CDDcd000862.73E-8232No hitNo description
SuperFamilySSF466896.84E-10240IPR009057Homeodomain-like
PfamPF059202.6E-10227IPR008422Homeobox KN domain
Gene3DG3DSA:1.10.10.607.3E-15235IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    Send to blast
MDKQNLAKQT GITRNQVSNW FINARVRLWK PMVEEVHSLE MHQKHQPSAG REQPRPHSSS  60
KVSMFGGASN HERVSLTLGL EECGDAYFGK DVGSRLLQDF VG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009419952.11e-71PREDICTED: BEL1-like homeodomain protein 9
SwissprotQ9SJJ32e-19BLH8_ARATH; BEL1-like homeodomain protein 8
TrEMBLM0RER11e-72M0RER1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P02340_0013e-72(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44332945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.11e-20BEL1-like homeodomain 8